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Published 20 hours ago • verified publisher icon nickjcroucher

Reference base in VCF file

Open ramadatta opened this issue 1 year ago • 0 comments

Hi,

Thank you for the amazing tool to filter recombination regions. May I kindly check, if the reference base in the vcf file is created based on the consensus from the alignment or based on the first sequence in the alignment file?

ramadatta avatar Aug 17 '22 02:08 ramadatta