DeepNovo
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ImportError: cannot import name rnn_cell_impl
Hi @nh2tran,
I'm trying to run Deepnovo for my sample, and I got the following error. I've got the same error when I tried Step 1.
python deepnovo_main.py --train_dir train.example --train
vocab_reverse ['_PAD', '_GO', '_EOS', 'A', 'R', 'N', 'Nmod', 'D', 'Cmod', 'E', 'Q', 'Qmod', 'G', 'H', 'I', 'L', 'K', 'M', 'Mmod', 'F', 'P', 'S', 'T', 'W', 'Y', 'V']
vocab {'_GO': 1, '_EOS': 2, '_PAD': 0, 'Mmod': 18, 'A': 3, 'E': 9, 'D': 7, 'G': 12, 'F': 19, 'I': 14, 'H': 13, 'K': 16, 'M': 17, 'L': 15, 'Nmod': 6, 'N': 5, 'Q': 10, 'P': 20, 'S': 21, 'R': 4, 'T': 22, 'W': 23, 'V': 25, 'Y': 24, 'Cmod': 8, 'Qmod': 11}
vocab_size 26
SPECTRUM_RESOLUTION 10
WINDOW_SIZE 10
MAX_LEN 30
_buckets [12, 22, 32]
num_ion 8
l2_loss_weight 0.0
embedding_size 512
num_layers 1
num_units 512
keep_conv 0.75
keep_dense 0.5
batch_size 128
epoch_stop 20
train_stack_size 4500
valid_stack_size 15000
test_stack_size 4000
buffer_size 4000
steps_per_checkpoint 100
random_test_batches 10
max_gradient_norm 5.0
Traceback (most recent call last):
File "deepnovo_main.py", line 15, in