Noah Fahlgren

Add image data structure classes

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**Describe your changes** This PR contains prototype features for the purpose of discussion and development. Adds Python classes for image data structures, subclassed from NumPy n-dimensional arrays. In the current...

**Describe the bug** In the PR template the link to the pr_review_process document is based on the `stable` docs URL, but since the new docs page has not yet been...

Revising our code of conduct and removing non-inclusive language from our code

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**TL;DR**: I propose updating our code of conduct and changing the name of our default branch. Inclusive language ------------------ This discussion was spurred on for me by reading this [ZDNet](https://www.zdnet.com/article/github-to-replace-master-with-alternative-term-to-avoid-slavery-references/)...

Save results in CSV format without overwriting the file

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**Is your feature request related to a problem? Please describe.** `plantcv.outputs.save_results` will add data to an existing JSON file but it overwrites an existing CSV file. If you want to...

Update PlantCV to output NA values when no plant/object is detected

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**Is your feature request related to a problem? Please describe.** @kmurphy61 described the issue well in #710. Currently, when no plant or object is detected, PlantCV will not output measurements,...

Photosynthesis analysis quality filtering

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**Is your feature request related to a problem? Please describe.** When we calculate a metric like `(Fm - F0) / Fm`, there can be some quality control issues. One that...

### Description Some of the filenames from the DDPSC phenotyping system have more metadata variables in the filenames than we have terms to account for. In the case I am...

Use Altair for graphing data

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**Is your feature request related to a problem? Please describe.** The current graphing package we use is good, but @dschneiderch raised some good sustainability issues and suggested we look at...

### Description I think a big feature we are missing is a method for doing at least basic data analysis after image processing. It's a hard problem of course, because...

### Description We have PlantCV automatically deployed in Docker Hub, I think we can also automatically deploy a Singularity container build in Singularity Hub. ### Details This will add support...