Noah Fahlgren
Noah Fahlgren
Hi @ryaddenni, Typically you would not collect training data for all of the images in your dataset, just one or more relevant sample images. As long as there is consistency...
Hi @AubreyHawks, could you upload your notebook here? GitHub does not allow attaching files ending in `ipynb` but if you zip the notebook first it will let you upload it....
Hi @AubreyHawks, your workflow looks good. You are able to see the individual results for each plant in your output CSV file correct? Is it just that you want a...
Ah okay I think I see! We record results in the background in `pcv.outputs`. And as you have seen you can record more than one set of results by using...
Definitely worth considering the performance implications of re-detecting contours for each function that needs them. Another issue might be memory, i.e. do we consume more memory by storing "contours" in...
I'm picturing a very simple class like this: ```python class Contours: def __init__(self, contours, hierarchy): self.contours = contours self.hierarchy = hierarchy ``` Example use using `pcv.find_objects`: ```python import cv2 import...
It would be defined in `plantcv/plantcv/__init__.py`. Sorry, it's a bit confusing because an OpenCV contours data structure is itself a list. I am picturing that the `Contours` class would have...
Ah I missed your other suggestion. The class could be called `Objects` instead of `Contours`
That's a good question. One way we have thought about identifying objects/ROIs is just by their position in a list. So if you have one object/ROI they are ID =...
Hi @gsainsbury86! A bit more background on our current approach. You are correct that the only entry point for metadata is currently through running `plantcv-workflow.py`. The process looks roughly like:...