Noah Fahlgren
Noah Fahlgren
It should have been `outputs.observations` etc. We would also need to deal with different sample names rather than hardcoding "default"
Maybe `find_tips` and `find_branch_pts` could become private functions and a `label` input could be added to `segment_sort`, where `segment_sort` would run the other two?
I would be surprised if the JSON file was over a size limit, we have generated multi-gigabyte JSON files from the analysis of 100K+ images. To me it looks like...
It sounds like it can potentially be OS-specific and I have only generated the larger JSON files on Linux, so maybe on Windows it's hitting a limit. In your configuration...
What if the button code (for three buttons) ultimately looked like this? ```markdown [](https://mybinder.org/v2/gh/danforthcenter/plantcv-tutorial-arabidopsis-tray/HEAD?labpath=index.ipynb) [](https://github.com/danforthcenter/plantcv-tutorial-arabidopsis-tray) ``` 
Hi @AdamDimech, the program initially downloads the blob files but then should extract the raw image out and convert it to a PNG and removes the blob. When that fails...
Hi @AdamDimech, the CSV file is definitely helpful. What I can see in it is that each wavelength is stored as a separate file. Assuming it is a 16-bit image,...
Thanks @AdamDimech, I got a bit closer using what you posted above. I realized in the SQL query results that the image dimensions vary. This must be a line scan...
@all-contributors please add @afinit for code, doc, test.
I don't think there is a typo. In PlantCV v3 the input file is the DAT file, but in v4 it is the INF file. In the links above you...