Noah Fahlgren

Results 121 comments of Noah Fahlgren

It should have been `outputs.observations` etc. We would also need to deal with different sample names rather than hardcoding "default"

Maybe `find_tips` and `find_branch_pts` could become private functions and a `label` input could be added to `segment_sort`, where `segment_sort` would run the other two?

I would be surprised if the JSON file was over a size limit, we have generated multi-gigabyte JSON files from the analysis of 100K+ images. To me it looks like...

It sounds like it can potentially be OS-specific and I have only generated the larger JSON files on Linux, so maybe on Windows it's hitting a limit. In your configuration...

What if the button code (for three buttons) ultimately looked like this? ```markdown [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/danforthcenter/plantcv-tutorial-arabidopsis-tray/HEAD?labpath=index.ipynb) [![Static Badge](https://img.shields.io/badge/Open%20on%20GitHub-black?style=flat&logo=github)](https://github.com/danforthcenter/plantcv-tutorial-arabidopsis-tray) ``` ![Screenshot 2023-08-24 at 10 24 29 PM](https://github.com/danforthcenter/plantcv/assets/6233508/d17bfd2f-7875-4c81-a1d3-e40a86f505c9)

Hi @AdamDimech, the program initially downloads the blob files but then should extract the raw image out and convert it to a PNG and removes the blob. When that fails...

Hi @AdamDimech, the CSV file is definitely helpful. What I can see in it is that each wavelength is stored as a separate file. Assuming it is a 16-bit image,...

Thanks @AdamDimech, I got a bit closer using what you posted above. I realized in the SQL query results that the image dimensions vary. This must be a line scan...

@all-contributors please add @afinit for code, doc, test.

I don't think there is a typo. In PlantCV v3 the input file is the DAT file, but in v4 it is the INF file. In the links above you...