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pipeline no longer compatible with newest STAR 2.7.11b

Open gvogler opened this issue 8 months ago • 0 comments

Description of the bug

STAR 2.7.11b --- 2024/01/24 ::: Minor in one parameter. Latest Replaced --quantTranscriptomeBan parameter with --quantTranscriptomeSAMoutput

This breaks the rnaseq workflow since it is missing the renamed parameter.

Command used and terminal output

No response

Relevant files

No response

System information

N E X T F L O W ~ version 24.04.2 nf-core/rnaseq v3.14.0-gb89fac3

gvogler avatar Jun 12 '24 11:06 gvogler