mag
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nf-core
Assembly and binning of metagenomes
### Description of feature https://github.com/BinPro/CONCOCT At the request of @alexhbnr
### Description of feature I was reading the SourMash documentation, and noticed it can be used for genome classification. Could be a nice one to have - there are pre-made...
Version `2.13.1` of [nf-core/tools](https://github.com/nf-core/tools) has just been released with updates to the nf-core template. This automated pull-request attempts to apply the relevant updates to this pipeline. Please make sure to...
## PR checklist - [ ] This comment contains a description of changes (with reason). - [ ] If you've fixed a bug or added code that should be tested,...
### Description of the bug Nextflow workflow report Workflow execution completed unsuccessfully! The exit status of the task that caused the workflow execution to fail was: 1. The full error...
## PR checklist - [X] This comment contains a description of changes (with reason). - [X] If you've fixed a bug or added code that should be tested, add tests!...
### Description of feature Seems to be tripping people up is that they don't have GTDB results for some of their bins https://nfcore.slack.com/archives/CE6SDBX2A/p1708189315383339?thread_ts=1707403870.961809&cid=CE6SDBX2A https://nfcore.slack.com/archives/CE9MS66BS/p1710942695546379?thread_ts=1710942636.651329&cid=CE9MS66BS
### Description of the bug Process `NFCORE_MAG:MAG:GTDBTK:GTDBTK_CLASSIFYWF (SPAdes-MaxBin2-prokarya-unrefined-FF07295009)` terminated with an error exit status (1). Command "mv identify/* .", which errors with: "mv: can't rename 'identify/*': No such file or...
nf-core/mag v2.5.4-ge486bb2 Run Name: bq-mag19 nf-core/mag execution completed unsuccessfully! The exit status of the task that caused the workflow execution to fail was: 2. The full error message was: Error...
