cwl2nxf icon indicating copy to clipboard operation
cwl2nxf copied to clipboard

Secondary files

Open KevinSayers opened this issue 7 years ago • 1 comments

Add support for CWL secondary files. These files are files which must be present in the processing folder, but are not necessarily inputs. In nextflow these files should just be listed as inputs I believe so they are copied into the working directory.

KevinSayers avatar May 03 '17 19:05 KevinSayers

secondary files should also be handled from the input parameters file. Shown as part of a list below.

    - [{class: File, path: bar.file, secondaryFiles: [{class: File, path: foo.file}]}]

KevinSayers avatar May 24 '17 10:05 KevinSayers