nrn treeset: replace sparse13 by eigen

Oct 23 '24 17:10 alkino

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Nov 07 '24 17:11 bbpbuildbot

Quality Gate passed

Issues
12 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
4.0% Duplication on New Code

See analysis details on SonarCloud

Nov 08 '24 13:11 sonarqubecloud[bot]

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Nov 08 '24 14:11 bbpbuildbot

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Jun 24 '25 05:06 azure-pipelines[bot]

✔️ b3fff80483fb6082c47bf06b4bb86d4c4d789f8a -> artifacts URL

Jun 24 '25 06:06 github-actions[bot]

The only remaining failure is still the NEURON demo. A reproducer is a bit hard to get using the nrniv binary (so we can actually use a debugger), but looks roughly like this (running from the root of the repo, and using build as the build dir):

NRNHOME="${PWD}/build/" NRNDEMO="${PWD}/build/share/nrn/demo/" HOC_LIBRARY_PATH="${PWD}/build/share/nrn/lib/hoc:${PWD}/build/share/nrn/demo" ./build/bin/nrniv -dll ./build/share/nrn/demo/release/x86_64/libnrnmech.so ./build/share/nrn/demo/demo.hoc -c 'demo(6)' -c 'run()' -c 'quit()'

@nrnhines I am attaching a full traceback that can be used with the rr debugger, which can be downloaded here (I've added docs about rr in https://github.com/neuronsimulator/nrn/pull/3506). The traceback should also work in a Docker container (for reference, I'm running Ubuntu 24.04 LTS).

Jun 24 '25 15:06 JCGoran

Quality Gate passed

Issues
10 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
4.0% Duplication on New Code

See analysis details on SonarQube Cloud

Jul 18 '25 09:07 sonarqubecloud[bot]

✔️ a4ac9072c8038f2be8eee9505ca9a1579bef7e9f -> artifacts URL

Jul 18 '25 09:07 github-actions[bot]

✔️ a4ac9072c8038f2be8eee9505ca9a1579bef7e9f -> Azure artifacts URL

Jul 18 '25 09:07 azure-pipelines[bot]