neuronflow

[FEATURE] log inference times

1

**Is your feature request related to a problem? Please describe.** We need to know the inference times of algorithms per exam. **Describe the solution you'd like** Medperf should log and...

[question] how to avoid ram buildup?

4

I am running inference on a large test set (>1200 3D brain scans) with 240x240x155. I call the evaluator like this. Prediction and Label are lists of the label and...

[feature request] flag for "approximation" of Hausdorff distance (and maybe also other metrics)

1

Hausdorff distance is a metric commonly appreciated by reviewers. If prediction or label are empty pymia correctly returns Inf. However, this way meaningful aggregation and comparison becomes impossible. Therefore, there...

Please do add center line dice score to the evaluation pkg. described here: https://arxiv.org/abs/2003.07311 We came up with this probably very inefficient implementation (not tested): ``` from skimage.morphology import skeletonize,...