stimfit
stimfit copied to clipboard
Crash after opening trace
crash (15).zip I am extracting EPSC-s using the event detection tool. After I extract them and start browsing it crashes on a particular trace. For example here in this file on the 15th. I have opened the file in clampfit, and that traced looked normal. I've checked and is the same lenght as the others. If I concatenate all the traces including the 15th, I can open the concatened file. I've tried opening the trace by transfering the whole matrix to numpy array then opening it with stf.new_window(). The program crashed again. What could cause the issue?
Would you please report us the Stimfit version and your operating system?
I am using windows 10 and the latest stimfit version
I checked your example file, and indeed there is a bug in the biosig import. This is fixed in https://sourceforge.net/p/biosig/code/ci/94166059363d9f06670d178f745142785a16f85c/
At the moment I do not have a working toolchain to rebuild a full version of stimfit with embedded python for Windows. As a workaround, I can provided the following:
- stimfit (w/o python) for windows 64bit
- the converter "save2gdf.exe" for converting your data to a format that is readable by older versions of stimfit
- The converted data file save2gdf 'crash (15).atf' 'crash (15).gdf'
These files are available from here: https://seafile.ist.ac.at/f/9373808f79e341a0bd80/?dl=1
The problme should be fixed with stimfit 0.16.2 or later. Let us know if this is not the case.