Kieron Taylor

Start codon handling in 1.7.x

8

The following fix was applied to 1.7 releases to deal with NNN mapping to a stop codon. https://github.com/bioperl/bioperl-live/commit/260ebb98281ce5580c9c1b9808d3167688c7626c Ensembl also encounters unexpected behaviour around the handling of start codons, where...

Our web servers have a Squid proxy protecting them which prevents GET with body. The default setting in Transport can (?) be overridden via argument to the constructor in the...

I'm attempting to use the scroll API against Elasticsearch v6.3.0 with Search::Elasticsearch v6.0 ```perl for my $name (@species) { $iterable = $es->scroll_helper( index => 'trackhubs_v1', body => { query =>...

**Describe the bug** The links described here: https://github.com/sanger/sequencescape/tree/v14.31.0?tab=readme-ov-file#documentation do not seem to resolve on the production sequencescape, or on yard. **To Reproduce** https://sequencescape.psd.sanger.ac.uk/docs https://sequencescape.psd.sanger.ac.uk/docs/sequencescape https://www.rubydoc.info/github/sanger/sequencescape **Expected behaviour** Hoped for docs,...