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can no longer create a working mesmerize conda env.

Open bbboon opened this issue 6 months ago • 2 comments

I have tried to re-install the caiman and mesmerize-core in a conda environment, yet mamba cannot resolve the environment specs.

error libmamba Could not solve for environment specs The following package could not be installed └─ mesmerize-core =* * is not installable because it requires └─ caiman >=1.9.10 * but there are no viable options ├─ caiman [1.10.1|1.10.2|...|1.9.16] would require │ └─ tensorflow >=2.4.0 *, which does not exist (perhaps a missing channel); └─ caiman [1.11.1|1.11.2|1.11.3|1.11.4] would require └─ tensorflow >=2.4.0,<2.16 *, which does not exist (perhaps a missing channel).

I am at a loss to keep trying this. Maybe someone has a .yml file or dockerfile where all of this is fixed?

bbboon avatar Jun 13 '25 12:06 bbboon

Are you on Windows? If so, you do have to use the defaults channel at least to install tensorflow, as the windows build stopped being updated on conda-forge.

ethanbb avatar Jun 13 '25 12:06 ethanbb

@bbbon if you're still having issues with this, see my comment here: https://github.com/flatironinstitute/CaImAn/issues/1517#issuecomment-3192161642

ethanbb avatar Sep 04 '25 15:09 ethanbb