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Published 20 hours ago • verified publisher icon ndierckx

Using Nanopore and Illumina combined reads for Mitochondrial Genome Assembly

Open manjumoorthy95 opened this issue 3 years ago • 1 comments

Can we use both Nanopore and Illumina reads concatenated together into a single fastq file for the Mitochondrial genome assembly using Novoplasty? Or is Novoplasty specific for Illumina Data?

manjumoorthy95 avatar Feb 02 '22 12:02 manjumoorthy95

Hi,

Sorry forgot to reply! For now it works only on illumina data, although I have version for hybrid assembly (ONT&Illumina) that I will make available in the future when I have some time, but won't be in the next 2 months

ndierckx avatar Mar 01 '22 20:03 ndierckx