MICA
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ndaniels
MIcrobiomes using Compressive Acceleration
Hello! Could you create a new database for mica with a more up to date version of nr? The 2015 version is a bit out of date at this point....
mica-psisearch neglects to set the num_threads parameter for psi_blast pull-request https://github.com/ndaniels/MICA/pull/9 fixes this and significantly improves mica-psisearch's performance on multithreaded machines
In the README under the compatibility note section, you [link](https://giant.csail.mit.edu/gems/diamond) to the version of DIAMOND used for the paper but the link is broken and returns "connection refused".
Hi there, The README file says that the easiest way to use the program is to download the precompiled binaries. However the link to the linux 64 package is currently...
I'm getting the following error while using MICA ``` Error processing queries: Could not decompress coarse sequence 16859848 (16, 43): Could not read compressed sequence: Could not scan coarse sequence...
The database available on gems.csail.mit.edu at the time of writing is improperly formatted and will cause MICA to fail. The headers in the coarse.fasta file are formatted as '> seqname'...