Download data using docker is not working as expected

[praveenraj2018]

hello Daniel,

I just tried downloading the data using the docker run, however it seems to be not working as expected.

docker run -v /apps/reference/:/data quay.io/biocontainers/fusioncatcher:1.33--hdfd78af_0 download-human-db.sh .

outputs:

Downloading Human Ensembl v98 database to /usr/local/share/fusioncatcher-1.33/db//current/...
Connecting to sourceforge.net (204.68.111.105:80)
Connecting to sourceforge.net (204.68.111.105:443)
wget: server returned error: HTTP/1.1 404 Not Found
Connecting to sourceforge.net (204.68.111.105:80)
Connecting to sourceforge.net (204.68.111.105:443)
wget: server returned error: HTTP/1.1 404 Not Found
Connecting to sourceforge.net (204.68.111.105:80)
Connecting to sourceforge.net (204.68.111.105:443)
wget: server returned error: HTTP/1.1 404 Not Found
Connecting to sourceforge.net (204.68.111.105:80)
Connecting to sourceforge.net (204.68.111.105:443)
wget: server returned error: HTTP/1.1 404 Not Found
cat: 'human_v98.tar.gz.*': No such file or directory
tar: invalid magic
tar: short read

Is there any specific reason why it is not working? Any help would be useful.

[ndaniel]

If you download the data manually using for example this script https://github.com/ndaniel/fusioncatcher/blob/master/data/download-human-db.sh does it work? It is not clear if this is an issue with the firewall blocking sourceforge.net or not.