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Will look into generating a traditional enrichment plot (below) using a pseudobulk approach. This will require a increase in speed similar to the issues discusses in #76 

ncborcherding

Hello, Thank you for developing this tool! I have a few pathways that are enriched in some of my patients vs controls and I wanted to see what genes are...

basedank

splitEnrichment with >2 levels

3

Hey @ncborcherding - I have a dataset where there are 3 sample groupings that I'd like to compare. Is it possible to implement something in `splitEnrichment` that allows for >2...

jeremymsimon

Thoughts on cluster/celltype filtering

1

Hi all, Loving the tool and have been playing around with it. I haven't delved too far into the gsVA/ssGSEA code, so that might be addressed there. Feel free to...

LinearParadox