ngs-tools icon indicating copy to clipboard operation
ngs-tools copied to clipboard

Way to access NCBI STAT data in bulk

Open Jalapenobadger opened this issue 4 years ago • 3 comments

Hi, I'm wondering is there any way to access the taxonomic data that STAT is automatically generating on each NCBI run? Every metagenomic upload on the SRA has this analysis generated and displayed as a Krona, but is there a route by which we could download this data in simple text form for playing around with association rule mining?

Also, is there a roadmap or website besides github anywhere dedicated to this project? Is there anywhere people can find more information about STAT like who works on it or what your future goals for it might be?

Thanks! -Pete

Jalapenobadger avatar Jan 24 '20 15:01 Jalapenobadger