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Published 20 hours ago • verified publisher icon ncbi
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This repository contains the source code of JUDI, a workflow management system for developing complex bioinformatics software with many parameter settings. Bioinformatics pipeline: Just Do It!

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"TypeError: too many positional arguments" when running the example in readthedocs

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When running the example in https://pyjudi.readthedocs.io/en/latest/judi-tasks.html I get the following error: ``` $ doit -f j.py /home/ubuntu/miniconda3/envs/genomics.py3/lib/python3.7/site-packages/tqdm/std.py:699: FutureWarning: The Panel class is removed from pandas. Accessing it from the top-level...

gilhornung avatar gilhornung

Fix input of combine function

This shows how to constrain the paramspace based on what value the wildcard game has.

johanneskoester avatar johanneskoester

Use JUDI and review accompanied publication

soumitrakp avatar soumitrakp

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verified publisher icon ncbi

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This repository contains the source code of JUDI, a workflow management system for developing complex bioinformatics software with many parameter settings. Bioinformatics pipeline: Just Do It!

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