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Can I use IDR to analyze ChIPseq or Cuttag data of histones?

Open AIBio opened this issue 4 years ago • 0 comments

Hi, I'm confusing about how to get the reproducible peaks from replicates of histone data. The IDR is recommended in ENCODE pipeline for TF ChIPseq data. How about histone data? Can I continue to use IDR to do the same task? I'm looking forward your reply. Thanks~ Hanwen

AIBio avatar Jul 02 '20 11:07 AIBio