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Published 20 hours ago • verified publisher icon nboley

IDR on gappedPeak format file

Open jma1991 opened this issue 7 years ago • 0 comments

For certain histone modifications, ENCODE uses the gappedPeak representation. Right now IDR doesn't support using gappedPeak files - is there a workaround for this? For example, converting a gappedPeak file to narrowPeak file? Or running IDR on the broadPeak file and selecting features in the gappedPeak file which intersect with it?

jma1991 avatar May 13 '17 10:05 jma1991