Nathan Weeks
Nathan Weeks
The use of `is not` with a string literal argument can result in a warning for Python versions >= 3.8 https://github.com/agshumate/Liftoff/blob/8d1a6246296f0d7000442e16e4ae5ca0069a287f/liftoff/run_liftoff.py#L43 e.g., using the most recent [Biocontainers](https://biocontainers.pro/) build of liftoff...
While trying to create a bioconda recipe for spaln, I ran into an issue concerning long pathnames generated during the conda build process that cause an error during `make install`:...
The -culling_limit option is occasionally useful for filtering, and can reduce run time as well. It would be helpful if this were supported by Galaxy BLAST+.
For users who run tensorboard on a multi-user host (e.g., on a shared compute server, or HPC cluster [as in this example](https://hpc.nih.gov/docs/deeplearning/tensorboard.html)), it would be beneficial for security to allow...
**Describe the bug** The fluxconfig-agent controller uses a hostPath volume mount that attempts to access a `/var/lib/docker/containers` directory on the host. When the [Kubernetes cluster pod hostPath volumes should only...
Make RStudio link point to https://github.com/rstudio/rstudio (instead of https://github.com/jupyterlab/jupyterlab) for consistency with: https://github.com/kubeflow/website/blob/f88fcc0ac728873b561fa510c8d80b7d8a87b48d/content/en/docs/components/notebooks/container-images.md?plain=1#L7
docker.io/ncbi/blast-static:2.15.0 images haven't been built yet: https://hub.docker.com/r/ncbi/blast-static/tags
A custom track uploaded from a file will be loaded with Bio::DB::SeqFeature::Store::GFF2Loader if it has a .gff suffix, even if the file contains "##gff-version 3" as the first line. Since...
gbrowse accepts a "dbid" URL parameter; however, gbrowse_details requires "db_id". To avoid confusion, it would be beneficial for gbrowse_details to also accept "dbid", while also accepting "db_id" for backward compatibility;...
The "GBrowse Configuration/URL schema" documentation (http://gmod.org/wiki/GBrowse_Configuration/URL_schema) states that for the "enable" and "disable"parameters, multiple tracks can be specified by specifying the track names separated by "+" or "-" characters; however,...