Nalini Ganapati

> @nalinigans Thanks for this! What changed in the [combined_with_genotypes.g.vcf.gz (https://github.com/broadinstitute/gatk/pull/8759/files#diff-0c62eda00e61538d71e15979bb9a3cb28a7af64f36f94e040dea51cad5a000b0) file? Some of the representative changes (second line has the no-call after genomicsdb changes): orig : chr20 17959479 ....

@droazen, note that I have published only a 1.5.3 snapshot version of genomicsdb. If these changes are good, I will make a full release of 1.5.3 and reference that in...

> @droazen, note that I have published only a 1.5.3 snapshot version of genomicsdb. If these changes are good, I will make a full release of 1.5.3 and reference that...

@droazen, I had merged from master last week, wondering if this can be pulled in? Thanks.

> @nalinigans Yes, we just need to take a peek inside the VCF file you updated. Were there any additional changes to that VCF when you updated to the latest...

Fixed in #321

I think this is fixed by https://github.com/GenomicsDB/GenomicsDB/pull/270.

@lima1, just last week built GenomicsDB on a `macOS m2 arm64` and it built fine using `clang` although I had a couple of tests failing. Can you please add the...

@lima1, can you please try the develop branch and see if that fixes your issues building on `amd64 Dockerimage on my new M2 MacBook Pro`? Thanks.

Thanks @lima1. Nothing recently added yet. But, you don't need to specify reference genome unless you are generating a vcf. I will be adding support for a protobuf export configuration...