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Published 20 hours ago • verified publisher icon muellan

Ion Xpress (Ion Torrent)

Open jaimeortiz-david opened this issue 2 years ago • 1 comments

Hi,

I wonder if metacache can also work with Ion Torrent fastq files (single-ended)? Do these types of files need any pre-processing?

Many thanks,

Jaime

jaimeortiz-david avatar Apr 08 '22 21:04 jaimeortiz-david

Sorry that I overlooked this issue for so long. We don't have any experiences with Ion Torrent files. As long as FASTA or FASTQ files contain DNA sequences (so letter A,C,G,T, N, a, c, t, g, n) they can be used with MetaCache.

muellan avatar Mar 11 '24 10:03 muellan