mtekman

okay, I will push tomorrow just in case more time is needed, thanks!

Thanks all! The message I am getting now is: > WARNING: R CMD check exceeded 10 min requirement My examples (and indeed the vignette) require at least 1000 features to...

Hi @lshep, thanks for the warning! I've also noticed that my code falls apart if there is no "time" component in my phenotype data, so this is something I will...

Hello again, new version with: * Changed `~/` → `tempdir()` * Fix to phenotype data without time info * Linting checks, default checks, biocchecks * Reduced test time from 10m...

Dear Dario, Thank you for your comprehensive review, you have definitely given me a lot to think about. > - RangedSummarizedExperiment, makeExampleDESeqDataSet, tximport, > Installation, better unit tests. Thanks for...

You just blew my mind about the base R pipe, I genuinely thought that was a dplyr implementation only. I guess I will try `formatR` as a linter, cheers

Hello @jorainer, thanks for the comments! > The general idea to create custom annotations or add additional sequence/gene information to reference genomes is however really nice. Exactly, I was surprised...

@lshep Thanks, I've fixed the issue! Sorry for the long delay, it was a busy month

@lshep I'm not sure how to get around these errors. The main problem with them is that sometimes a file downloads incomplete and then the checksum fails, but sometimes this...

I don't, but the code does check to see if the file has already been downloaded to the temp folder. I think the main issue is the sheer size of...