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Published 20 hours ago • verified publisher icon msmbuilder

What are the units of distance in dihedral clustering?

Open vvoelz opened this issue 9 years ago • 2 comments

Suppose I perform dihedral clustering and MSMBuilder reports that the cluster radius is 1.8. What are the units here? I know that the the angles phi_i get projected 2-fold onto x1_i = cos(phi_I) and x2_i = sin(phi_i). What is the "rmsd" that gets reported?

vvoelz avatar Oct 08 '14 20:10 vvoelz