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output

Open BGI2016 opened this issue 2 years ago • 0 comments

Hello,I would like to know how to determine the occurrence of LOH for an HLA allele from the output file. My value of HLA_type1copyNum_withBAFBin and HLA_type2copyNum_withBAFBin are negative.Is the output HLA_type1copyNum_withBAFBin and HLA_type2copyNum_withBAFBin the log2 value of the copy number?

BGI2016 avatar Oct 27 '22 08:10 BGI2016