Mitchell Stanton-Cook

https://pipelin.es/ [email protected]

@Xero Brisbane, Australia DevOps Enablement @Xero. Previously: Eng Director @Mastercard, Team Lead @Ladbrokes, Solutions Consultant @itoc. Likes dev, ops, sec, ci, cd, clouds

Results 18 issues of


                                            Mitchell Stanton-Cook

Combine HSP to make pseudo-hit

Hit shading by identity/score

Get Jun's "simple database header" code into master

Option to translate & cdhit for "closely related" genes

Need annotation?

Provide a single executable (pyinstaller)

database validator

1

comment

See basics at: https://gist.github.com/mscook/9965292

enhancement

Stashed some changes - not sure why...

See - https://gist.github.com/mscook/23abcd53934f75c6239b

Investigate the effects of using hsp.identities/float(record.query_length) >= tol vs max_identity >= tol

2

comment

question

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