mrhardman
mrhardman
@Scottyujia @mabarnes I have just noticed that the perpendicular flow shear terms connected to `apar` are likely missing, so perpendicular flow shear is likely not implemented properly in the electromagnetic...
[example_nonlinear_phiaparbpar_2.zip](https://github.com/user-attachments/files/16404699/example_nonlinear_phiaparbpar_2.zip) Example of a very low resolution nonlinear electromagnetic simulation in cyclone base case geometry. This case is definitely under-resolved but shows successful execution of the code. Made with ```...
Has any work been attempted on this issue since Aug 2023?
@bpatel2107 Yes it would be good to book some time in to look at this soon. We are looking to benchmark stella against other reliable codes for EM simulations, so...
The code changes to fix the issue raised here are in branch https://github.com/stellaGK/stella/tree/bugfix/pythontools_netcdf4_compatibility
I have now taken to using https://github.com/jfparisi/stella_tools/tree/master, a tool developed by jfparisi for stella, based on my original scripts for GS2. The main benefit of this script is speed: only...
Further notes: It looks like the function that requires upgrading is https://github.com/boutproject/xBOUT/blob/64408ea26de5751f6104fcd8598ab250e237b049/xbout/plotting/animate.py#L93, with changes to lines https://github.com/boutproject/xBOUT/blob/64408ea26de5751f6104fcd8598ab250e237b049/xbout/plotting/animate.py#L263-L271 needed to replace `Pcolormesh`. Unfortunately it looks like `animatplot` does not support a...
Changed base to master in response to @dschwoerer's review. Making master the base obscures slightly the changes made in `div_ops.cxx`. The changes to this with respect to #88 are simply...
@dschwoerer Could you please make a PR with your suggestions into this PR? It looks like some of the functions that you expect to be available are not.
With commit https://github.com/boutproject/hermes-3/pull/285/commits/9ecddebf7a3e57536989df88ced3804a3c0323e9 we can perform a diffusion test solving an equation (up to normalisation) of ```math \frac{\partial n}{\partial t} = \nabla \cdot \left( D_n \nabla_\perp n \right) ``` and...