Jamie Morton
@nbokulich that makes a lot of sense. And the refactored solution will ultimately require a solution something like that. Furthermore, getting this right will ultimately help with scalability. Currently looking...
Hi, @mdoolin2014 I'm assuming that you tried reading the installation instructions in the README (don't upgrade python / tensorflow). I'm wondering if your problem has to do with running this...
It'll probably be better to call this ``` mmvec single-omic --help mmvec paired-omic --help ``` Thoughts on this will also be appreciated
Hi @mstrazar , thank you for interest in mmvec! PR raised about setup.py update: https://github.com/biocore/mmvec/pull/112 Regarding installation, what have you tried so far? The conda installation has TF pinned. Could...
Regarding biom tables as input, there are no plans for passing in csv or tab, due to their inability to adequately represent sparse data. Furthermore, biom is also a standard...
Hi @mstrazar , we just cut a new release of mmvec that pins Tensorflow. Tensorflow 2.0 broke compatibility (which happened right before the paper went live) - so installing that...
:+1: On Thu, Mar 3, 2016 at 12:19 PM, tkosciol [email protected] wrote: > put it into micronota.parsers > > — > Reply to this email directly or view it on...
Yay On Mon, Mar 14, 2016 at 11:22 AM, tkosciol [email protected] wrote: > I'm onto it. > > — > Reply to this email directly or view it on GitHub...
@tkosciol should we drop this - it doesn't sound like the authors are willing to allow this to happen ...
Looking good! And don't forget to address the pep8/flake8 errors .