Ryan Moore

@scubalaina something to keep in mind about normalizations ...you will be changing the read counts which could have an affect on variance estimations. Check out this tiny example. It's a...

> I wonder how one could avoid compromising variance calculations without overestimating the abundance of longer genes if gene length isn't accounted for? ^ Yeah, that's a good question...as far...

I could take this issue and add some examples.

I did some profiling and it looks like the issue is in the rendering of the tree itself with most of the time being spent in browser reflow.

Consider leaving all labels off by default. It seems to help with the lagginess.

**tl; dr**: the setup in the fork works pretty much as expected with dune 3.12.1 and bisect_ppx 2.8.3. --- I downloaded the fork linked by the OP ([here](https://github.com/midorishibukawa/bisect-starter-dune)), but I...

Oh and it looks like another reason why this works okay is that it has aliased the runtest to be: ``` (rule (alias runtest) (action (run %{exe:tester.exe}))) ``` So it...

See [this](https://github.com/aantron/bisect_ppx/issues/411#issuecomment-1908546582) issue comment for more info.

The `/tmp` dir does work on the ubuntu and macOS github runners at least (that code I put in the repo originally I extracted from projects that use it in...

> The main issue here was just to add BISECT_FILE, is that right? ^ Regarding getting it to work with cram tests? For that you need to ensure that you...