David Molik

Err, this is not a functional ticket, but a testing ticket for me to try to use the SolrCloud container from Docker on Microsoft. Sorry for the confusion, moving back...

I believe the problem comes down to the following: ```{bash} [16:59:25] david.molik@ceres {/project/musca/Ensembl_musca_domestica/TE_annotations/EDTA} master$ singularity exec EDTA.sif /usr/local/bin/EDTA.pl --check_dependencies ######################################################### ##### Extensive de-novo TE Annotator (EDTA) v2.2.0 ##### ##### Shujun...

I checked another HPC I have access too: ```{bash} 09:59:48 [email protected] {/project/ag100pest/david.molik}$ singularity exec EDTA.sif EDTA.pl --check_dependencies INFO: Environment variable SINGULARITY_BIND is set, but APPTAINER_BIND is preferred INFO: Environment variable...

Did a lot more looking at the problem. This issue is in the "which" alias, some systems don't have the which --tty-only option which is causing the which statement to...