only 2K genes found after converting seurat object to AnnData

[gt7901b]

Hi,

I converted a serurat object to AnnData. It contains 217K cells. After conversion, only 2000 genes are found in AnnData object. Is there a way to preserve all the genes?

thanks for your time

Creating h5Seurat file for version 3.1.5.9900 , R 4.0

[LenisLin]

Hi,

I am facing the same problem, could you explain how did you solve it?

Thanks a lot!