Charles McAnany
Charles McAnany
(I'm using the bpnet conda environment, git commit de99967aa5) In bpnet/docs, ``` make build mkdir -p theme_dir/img/ipynb/ ./render_ipynb.bash pydocmd build make: pydocmd: Command not found make: *** [Makefile:13: build] Error...
Hoo boy. Got a rough one. I'm trying to run BPNet on chemical mapping data, and it gets to epoch one before it crashes. It doesn't even crash cleanly. There's...
genomelake lists itself as compatible with python 3.6, and this makes it the only package in basepair's conda environment that prevents me from using python 3.7 and its coroutine goodness....
In training two data sets with wildly different coverages, I'd like to be able to give separate counts loss weights. If I don't do that, then the data sets can...
This is just a suggestion, but I wanted to log it some place where we have a formal channel to discuss. Currently, in the input_data.json file, the user must provide...
The predict program currently uses input_data.json to both gather task information and get a list of peaks to predict. In the event that I want to train and predict on...
As I start complicating my interaction with BPNet more, I'd like to add a feature where the user can easily supply a network architecture and loss function to the program....
It'd be nice if --verbose added some more information about progress as the algorithm runs. As it stands, --verbose adds exactly two output lines in the entire program. While the...
### Issue type Bug ### Have you reproduced the bug with TensorFlow Nightly? No - I get other errors when I install tf-nightly. ### Source source ### TensorFlow version 2.17.0...