spVCF
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tabix slicing improvements
- Current logic extracts records with
POS >= qlo
(query low) but omits records withPOS < qlo && END >= qlo.
- More thorough testing would be nice.
- The way checkpoints are detected feels vaguely brittle.
It would help to require that a checkpoint record must not follow any other record whose END >= checkpointPOS (on the same contig)