mldmort

Hi, my Subfiles.txt contain: ``` /projects/long_reads/HS_founders/pacbio/demux/lima.bc1001--bc1001.bam /projects/long_reads/HS_founders/pacbio/demux/lima.bc1002--bc1002.bam /projects/long_reads/HS_founders/pacbio/demux/lima.bc1003--bc1003.bam /projects/long_reads/HS_founders/pacbio/demux/lima.bc1008--bc1008.bam /projects/long_reads/HS_founders/pacbio/demux/lima.bc1009--bc1009.bam /projects/long_reads/HS_founders/pacbio/demux/lima.bc1010--bc1010.bam /projects/long_reads/HS_founders/pacbio/demux/lima.bc1011--bc1011.bam /projects/long_reads/HS_founders/pacbio/demux/lima.bc1012--bc1012.bam ``` I thought that the names come from the bam files but it doesn't seems to. The...

Hi David, No, I have used symbolic links to point to my bam files to see if it solves the problem. So my new subfiles.txt file looks like: ``` ACI.bam...