Marianne Corvellec
Marianne Corvellec
With [Python 3.14](https://github.com/scikit-image/scikit-image/actions/runs/16033703760/job/45323679621?pr=7808) we get this error: `../scipy/meson.build:101:15: ERROR: Dependency "pybind11" not found, tried pkgconfig, config-tool and cmake` I couldn't find any mention of "pybind11" in scipy's meson.build file, but...
The same holds for the other morphological (gray) operations, so I'll wait until #7665 is merged to address this.
@AlexLouk seeing no failed checks at the moment :wink:
Weird... It's rendering fine here: https://scikit-image.org/docs/stable/api/skimage.measure.html#skimage.measure.manders_coloc_coeff  although the syntax doesn't follow exactly https://sphinx-rtd-trial.readthedocs.io/en/latest/ext/math.html https://github.com/scikit-image/scikit-image/blob/a160f384523ac70173d069954b7084bee79fb68e/skimage/measure/_colocalization.py#L137-L138 (blank line missing). I tried quickly applying this 'wrong' but working syntax above, but I'm...
@michaelbratsch is it okay if I assign this issue to you (cf. https://github.com/scikit-image/scikit-image/pull/7541#issuecomment-2351758494)? Thank you! :pray:
Thanks for raising this issue, @GParolini! Unfortunately, I don't have a substantial background in biology either. Would you mind clarifying what you mean by "set their own colour vectors?" If...
Hi @OswaldZhang, After reading you and re-reading the old related issues, I'm sold, we should have an `rgb2her` (and, conversely, `her2rgb`) function, in order to handle H&E (Hematoxylin + Eosin)...
Hi @OswaldZhang, Wonderful! I believe that @GParolini should be available in May. Please follow these [instructions](https://scikit-image.org/docs/stable/development/contribute.html) to get started with contributing to scikit-image. To write your `rgb2her` and `her2rgb` functions,...
@bpavie fyi
Thanks for using scikit-image, @jTiKey! This is a matter of image data type, indeed: `rgb2lab` calls `rgb2xyz` which calls `_prepare_colorarray` which calls `img_as_float32` or (in this case) `img_as_float64` to convert...