Maia Sosa Kapur

Thanks for the quick reply, just tried that and got the same error unfortunately. It's a new directory each time so I don't *think* it is reading in something incorrectly....

Hey Ian Only if you have the time/bandwidth that would be great — I’m about to begin a long commute and wasn’t going to touch this for another 2 hours....

Great — I’ll check back in if I don’t hear otherwise in a few hours, traffic permitting :) thanks so much for helping out with this! On Thu, Jul 11,...

Just got back! OK, I ran one one of our lognormal indices and received this error: `Error in plot(x = x[include], y = y[include], type = "n", xlab = labels[1],...

Thanks for revisiting this, I think the log = T/F argument is a simpler approach than the one I'd tried to implement (but didn't pull-request correctly). I just tested the...

This might be related so I'm documenting here before pasting another issue. I'm running v1.41.0 again on sablefish, and found that the index with negative Obs is suddenly not showing...

Thanks Ian, Hm...I updated to the latest r4ss via remotes and still have the same issue. It's fleet 4 (CPUE fleet) in the attached dat, if that helps. I'm not...

Great -- re-installing `r4ss` and extracting via `SS_output()` was able to render both `subplots` correctly. Thanks!

Sorry to haunt this issue. I realized that the pull request #326 got merged into `development`, and am wondering if it'd be feasible to get the changes into `master`, particularly...

Hm - still getting this: ```SSplotIndices(base, fleets = 4) Excluding fleet 4 from index comparison figure because it has negative values Error in if (show_input_uncertainty & !all(lower_input == lower_total)) {...