Mujeen Sung

Did you check the md5sum of the dump file?

Thanks for reaching out to us. As long as the training datasets for new types exist, the supported type of BERN2 can be expanded. We will consider providing how to...

Hi, thanks for letting us know. I hope it would work by installing faiss-cpu and cudatoolkit which is compatible with the mac os. Could you try it and let us...

Hi @kunlu-ou Thanks for reporting the issue. The script we've provided runs GNormPlusServer w/ nohup so that it can run in the background. According to what you've experienced, it seems...

Hi @kunlu-ou, thanks for sharing. It seems really odd. Could you see any error logs when one of them was killed? (either from the server.py side or the gnormplus side)...

Hi @kunlu-ou, sorry for the late response. GNormPlus on my server also starts on 127.0.1.1, so it wouldn't be a problem. It seems difficult to figure out the problem without...

Hi @Ufifus Sorry for the late response. Could you check if all processes for running BERN2 are alive? ``` ps auxww | grep ner_server.py ps auxww | grep GNormPlusServer.main.jar ps...

Hi @saha-shyamasree The dictionary pre-processing code can be found in https://github.com/dmis-lab/BioSyn/tree/master/preprocess. If you have any difficulties running the code, please feel free to leave further questions here.

I'm wondering about this, too.

Hi @Morph0124 The port number 18888 is designated for gnormplus, an external module that communicates with BERN2. Have you tried using localhost:8888 instead?