zeus
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minaskar
⚡️ zeus: Lightning Fast MCMC ⚡️
First of all, thanks for the package and all your hard work! I think I've encountered a couple of issues/bugs in the computation of the R-hat statistic. 1. First is...
...\anaconda3\envs\zeus\Scripts\zeus.py:2: DeprecationWarning: Using or importing the ABCs from 'collections' instead of from 'collections.abc' is deprecated, and in 3.8 it will stop working from collections import Iterable as IterableType It seems...
I'm repeatedly getting almost no mixing of the walkers, see the attached figure. In other examples, I saw that walkers didn't move at all (which seems to contradict the statement...
Hi all, I added a simple feature in `SaveProgressCallback` so that `blobs` are also saved (as a structured numpy array) alongside the chain samples and loglike values inside the (optional)...
Github recently released a [**new feature**](https://docs.github.com/en/repositories/managing-your-repositorys-settings-and-features/customizing-your-repository/about-citation-files) where repository owners can add a `CITATION.cff` file making it easy for others to cite the repository. Adding a `CITATION.cff` would make the attribution...
I'm trying a basic example, estimating mean and variance of a bivariate normal distribution given independent samples. For this example, the prior on the mean and variance is that they...
Hi @minaskar, I looked at the autocorrelation stuff you've just added, and it looks really useful. Thanks! https://github.com/minaskar/zeus/blob/658ad948b6f2e6edff88af8632b064b651e234fc/zeus/autocorr.py#L54-L65 I had a question/comment about the "mk" calculation. It looks like you're...
Unless I missed something, it doesn't seem like there's an option to supply a seed for the random number generator. If possible, I'd like to make my analyses reproducible. While...
Hi @minaskar, First of all: thanks a ton for this package! We were excited to read about it in your paper, and it looks so promising that our team has...
In `emcee` I added a PR for having named parameters ([proposal](https://github.com/dfm/emcee/issues/385), and the [PR](https://github.com/dfm/emcee/pull/386)). This allows for dict-like access to the parameters rather than positional references. Example: ```python x =...
