Milot Mirdita

Could you run the following please and paste the crash backtrace here: ``` cd build cmake -DCMAKE_BUILD_TYPE=Debug -DENABLE_CUDA=1 -DCUDAToolkit_ROOT=Path-To-Cuda-Toolkit .. make -j32 gdb --args ./src/foldseek createdb fastafile dbname --prostt5-model weights...

That's not a crash in cuda/gpu code. You said the same FASTA file was working using CPU, right? It looks like something is wrong with the sequences/fasta file. Can you...

I pushed changes that should immediately fail and print an error message if prostt5 cannot be loaded. Could you please pull the latest change and rerun? Hopefully that will help...

That looks like an unrelated error. Please delete the build folder and try again.

Interesting, @matchy233 corrosion is pinned (as part of a subtree). So I guess I should update to the latest 0.5.0 release to be consistent?

``` Error loading ProstT5: DriverError(CUDA_ERROR_UNSUPPORTED_PTX_VERSION, "the provided PTX was compiled with an unsupported toolchain.") when loading cast_f32_f16 ``` Okay this is interesting. This sounds like you need to update the...

That's the unrelated rust error above, you need to *NOT* use rust 1.79.

I fixed the block-aligner issue that was broken by rust 1.79. you should be able to compile again. I also made a docker file that should create a minimum sized...

The currently implementation works correctly. However, this thread opened my eyes how much of a maintenance dead-end the current candle based version is. We can't do static CUDA builds with...

You can do the foldseek databases call within the dockerfile to download the weights into the container. I personally would prefer to have small container images and mount weights into...