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verified publisher icon mikessh

Parser for "TRUST" TCR Seq

Open mtutert opened this issue 8 years ago • 1 comments

Would one of the developers please develop a parser for TRUST? Thanks.

https://bitbucket.org/liulab/trust/ https://www.nature.com/ng/journal/v49/n4/pdf/ng.3820.pdf

mtutert avatar May 05 '17 16:05 mtutert

I'm quite limited in time right now, but I can consider implementing it if

  • You can post an example input file here
  • You describe the correspondence between the input file fields and the basic fields of VDJtools format, see http://vdjtools-doc.readthedocs.io/en/latest/input.html#vdjtools-format

mikessh avatar May 05 '17 19:05 mikessh