microsoft
[Bug]: Segmentation fault (core dumped)
Describe the bug
When I referred to the guidebook for operation, I encountered the following error.
Segmentation fault (core dumped)
Steps to reproduce
- pip install graphrag
- mkdir -p ./ragtest/input
- curl https://www.gutenberg.org/cache/epub/24022/pg24022.txt > ./ragtest/input/book.txt
- python -m graphrag.index --init --root ./ragtest
Expected Behavior
create two files: .env and settings.yaml in the ./ragtest directory.
GraphRAG Config Used
before configuration generated
Logs and screenshots
Additional Information
- GraphRAG Version:0.1.1
- Operating System:Linux bras-base-otwaon1140w-grc-29-76-64-194-71.dsl.bell.ca 4.18.0-147.5.2.19.h1305.eulerosv2r10.x86_64 #1 SMP Tue Jun 6 07:58:07 UTC 2023 x86_64 x86_64 x86_64 GNU/Linux
- Python Version:Python 3.11.5
Are you running in a virtual machine? I started testing in a virtual machine in virtualBox, and I encountered this situation. After switching to a host, it worked. I ran it in Docker on the host, and the same Docker failed in the virtualBox virtual machine
Can you please add details about your hosting machine, and graphrag config?
Can you please add details about your hosting machine, and graphrag config?
Tried on Ubuntu 18.04.
Tried the basic 3 steps in the tutorial (https://microsoft.github.io/graphrag/posts/get_started/) .
pip install graphrag mkdir -p ./ragtest/input curl https://www.gutenberg.org/cache/epub/24022/pg24022.txt > ./ragtest/input/book.txt python -m graphrag.index --init --root ./ragtest
This resulted in Segmentation Error. No other error details. Tried with Python 3.10, 3.11, 3.12. Nothing worked.
Update: I checked on Ubuntu 20.04 and it worked. The issue is on Ubuntu 18.04.
Same Issue encountered
with system Ubuntu 22.04. No GPU s Only using CPU with 8 GB memory.
Python version: 3.11
same issue. Ubuntu 22.04 pytho 3.10.16 pip list Package Version
aiofiles 24.1.0 aiolimiter 1.2.1 annotated-types 0.7.0 anyio 4.7.0 anytree 2.12.1 asttokens 2.4.1 attrs 24.3.0 autograd 1.7.0 azure-common 1.1.28 azure-core 1.32.0 azure-identity 1.19.0 azure-search-documents 11.5.2 azure-storage-blob 12.24.0 beartype 0.18.5 certifi 2024.12.14 cffi 1.17.1 charset-normalizer 3.4.0 click 8.1.7 contourpy 1.3.1 cryptography 44.0.0 cycler 0.12.1 datashaper 0.0.49 deprecation 2.1.0 devtools 0.12.2 diskcache 5.6.3 distro 1.9.0 environs 11.2.1 exceptiongroup 1.2.2 executing 2.1.0 fnllm 0.0.10 fonttools 4.55.3 future 1.0.0 gensim 4.3.3 graphrag 1.0.1 graspologic 3.4.1 graspologic-native 1.2.1 h11 0.14.0 httpcore 1.0.7 httpx 0.28.1 hyppo 0.4.0 idna 3.10 isodate 0.7.2 jiter 0.8.2 joblib 1.4.2 json_repair 0.30.3 jsonschema 4.23.0 jsonschema-specifications 2024.10.1 kiwisolver 1.4.7 lancedb 0.17.0 llvmlite 0.43.0 markdown-it-py 3.0.0 marshmallow 3.23.1 matplotlib 3.10.0 mdurl 0.1.2 msal 1.31.1 msal-extensions 1.2.0 networkx 3.4.2 nltk 3.9.1 numba 0.60.0 numpy 1.26.4 openai 1.58.1 overrides 7.7.0 packaging 24.2 pandas 2.2.3 patsy 1.0.1 pillow 11.0.0 pip 24.2 portalocker 2.10.1 POT 0.9.5 pyaml-env 1.2.1 pyarrow 15.0.2 pycparser 2.22 pydantic 2.10.4 pydantic_core 2.27.2 Pygments 2.18.0 PyJWT 2.10.1 pylance 0.20.0 pynndescent 0.5.13 pyparsing 3.2.0 python-dateutil 2.9.0.post0 python-dotenv 1.0.1 pytz 2024.2 PyYAML 6.0.2 referencing 0.35.1 regex 2024.11.6 requests 2.32.3 rich 13.9.4 rpds-py 0.22.3 scikit-learn 1.6.0 scipy 1.12.0 seaborn 0.13.2 setuptools 75.1.0 shellingham 1.5.4 six 1.17.0 smart-open 7.1.0 sniffio 1.3.1 statsmodels 0.14.4 tenacity 9.0.0 threadpoolctl 3.5.0 tiktoken 0.8.0 tqdm 4.67.1 typer 0.15.1 typing_extensions 4.12.2 tzdata 2024.2 umap-learn 0.5.7 urllib3 2.2.3 wheel 0.44.0 wrapt 1.17.0
