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Published 20 hours ago • verified publisher icon microgenlab

custom database

Open Luponsky opened this issue 1 year ago • 1 comments

Hello,  Thanks to develop this fantastic pipeline. I'm looking forward to reading your paper! I have amplicons from a nanopore metabarcoding run that did not span 16S rRNA gene but another gene. I have a customized database for this gene, with one file with the reference fasta and another with the taxonomy of the fasta sequences. Do you have any suggestions of how to use it with the Minimap2 pipeline in Porefile? Thanks L

Luponsky avatar Jan 27 '23 09:01 Luponsky