Mathieu Guay-Paquet
Mathieu Guay-Paquet
This is a feature request that came out of the SCT dev meeting on 2023-07-27 ([minutes](https://docs.google.com/document/d/1ItApJQfajO2lRzOU2yenWbeRg6alfsdut3J4AVVdo78/edit#heading=h.3jazj3wbpm6z)). For someone who has a time-series of 3D images saved as a single 4D...
While going through the course material, on [this slide](https://docs.google.com/presentation/d/1t40Fd0fS0SwWR5FU_GWKEvHkB9d96LVddLQW6L3QAx0/edit#slide=id.p62), I noticed some strange behavior from `sct_label_utils -create-viewer` when quitting without saving: - The output file still gets written (or overwritten),...
This is not intended to be merged, just a hacky prototype to help @valosekj with https://github.com/spinalcordtoolbox/spinalcordtoolbox/issues/4166#issuecomment-1654175610. I haven't tested it, and it's definitely not the right way to expose this...
@sandrinebedard reports a Windows installation bug, when installing from `master` under WSL. The installation crashes in one of the `sct_download_data` commands in a non-crucial step, but it stops the further...
These are the PAM50 registered labels supplied by @yw7 in #155. I split the upload into two commits: 1. Some of the files are completely new, so there's no conflict....
Edited: > Why is caching handled by the callers to `sct_straighten_spinalcord`, but not `sct_straighten_spinalcord` itself? > > Currently, if `sct_straighten_spinalcord` is run standalone, no cache files will be generated, which...
These are the files provided by William Sirois at the end of his GBM3100 internship. Todo: - Figure out which `derivatives/` subfolder they should go into. - Rename the files...
We sometimes tell users to use `sct_analyze_lesion` when they have a structure which is _not_ a lesion, but for which they want similar statistics, for example the length, volume. Some...