Map Allele Frequency

[mandresapata]

Dear Manny,

I am trying to have access to an old raster.RData that was used as for plotting allele frequencies in world map:

load(url("http://github.com/mgimond/Spatial/raw/master/Data/raster.RData"))

Is this file not available anymore or has a different name in your repository?

Thank you in advance,

Mario

[mgimond]

Hi Mario,

That data file is no longer used in my online text. But it is available in the older version of the web resource as follows:

library(raster)
load(url("https://github.com/mgimond/Spatial_pre2021/raw/refs/heads/master/Data/raster.RData"))

However, it does not house an allele frequency map. I don't recall using such a dataset in my text. Do you recall where this dataset may have been referenced?

Cheers, Manny

[mandresapata]

Thank you Manny,

the data set is public and comes from here (allele frequencies for lactose persistence alleles): https://www.ucl.ac.uk/biosciences/gee/molecular-and-cultural-evolution-lab/global-lactase-persistence-association-database-glad And those are the type of map that I am traying to plot,

Best!

On Mon, Sep 23, 2024 at 4:54 PM Manny Gimond @.***> wrote:

Hi Mario,

That data file is no longer used in my online text. But it is available in the older version of the web resource as follows:

library(raster) load(url("https://github.com/mgimond/Spatial_pre2021/raw/refs/heads/master/Data/raster.RData https://urldefense.com/v3/__https://github.com/mgimond/Spatial_pre2021/raw/refs/heads/master/Data/raster.RData__;!!IKRxdwAv5BmarQ!caJGMRE1s1INjXw6LYOkjfLjVQZfaGfd0fSB1PJXuLjETOAlmL6v7Btfg9dOxljrg5bMG1jaNHiPLoeVqrNLWYF6Prs$"))

However, it does not house an allele frequency map. I don't recall using such a dataset in my text. Do you recall where this dataset may have been referenced?

Cheers, Manny

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