anvio
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[FEATURE REQUEST] anvi-script-kofam-accessions-to-hmms-directory ?
The need
The solution
Make anvi-script-kofam-accessions-to-hmms-directory
.
Or make anvi-script-accessions-to-hmms-directory
with an option for pfam
or kofam
.
I like anvi-script-accessions-to-hmms-directory
:) The only problem is the following: while HMMs from PFAM has model noise cutoff scores built-in, HMMs from KOFams do not (I am ready to stand corrected for this though). This problem may make it more difficult to mix and match things.