meichendong

Hi @dfermin , @tiagobrc , thanks for trying SCDC and reporting the bug! It looks to me that the possible reason triggered the error is, some cell types only exist...

Hi @zh-zhang1984 , Sorry for the late response. My first guess would be there is some issue in the individual deconvolution procedure. Have you ever tried to run deconvolution separately...

Hi @Dongxu-Zheng , do you have a toy example for me to try? My email is [email protected]

Hi @Dongxu-Zheng , if the single cell data and bulk data are from different tissues, you might want to consider whether they are comparable. Is it difficult to find public/other...

Hi! Thanks for using SCDC! I don't see this issue from my end, so if you could provide a toy data I can help to figure this out!

Hi @ljarassier , sorry for the late response. According to your description, I think the error occurred because some scRNA-seq datasets do not have certain celltypes. The ENSEMBLE procedure is...

Hi @sariya , Sorry for the late response. If the subjects are from the same study, then you could first put the expression data matrix together by doing rbind() or...

Hi @PelzKo , sorry for the late response! Is there a guideline to create a release? I would like to do so! I respond faster by email: [email protected] .

Hi, thanks for using SCDC! This part of code is used to accommodate the outliers or extreme values. Would you provide more information for me to debug? Thanks!

Hi! Thanks for using SCDC and sorry for the occurred error! Please make sure you are using the latest version. Yes, this issue has been reported before and I think...