meichendong

I had a similar problem that no model variable/object was returned. It seems that installing the package `hdf5r` solved my problem.

Hi @caiquanyou , Sorry for the late response. Generally when you have this error, it might be that your single cell dataset 'samplesID' only has one level. In this case,...

Hi @sistia01 , Sorry for the late response. For the error, please replace the "qc.3cl$sc.eset.qc" with "qc.3cl" in the function. Please email [email protected] if you have further questions.

Thank you for pointing out the problem @bvieth ! I appreciate your feedback!

Hi @RK1912 , I just updated some functions. I doubt the problem is that some individuals/subjects do not provide cells from certain cell types of interest. This would be a...

Hi Karsten, Thanks for using SCDC and sorry for the late response! I see the SCDC_prop() issue and I've made a correction for it. The bisque transformation was actually added...

Hi Karsten, Thanks for using SCDC! This is a good question. Currently, the ENSEMBLE function needs the input reference datasets to have overlapped cell types. In your case, if you...

Hi @lahuuki , good catch! I think you are correct. The function is updated now. Please let me know if you have further questions! Best, Meichen

Hi, thanks for using SCDC! What system are you using? Would directly download from github cause any error? I would like to fix it if so.

I see! Thanks for the suggestion! We will try to add it to conda later! I'll let you know when it's available!