BoneJ
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Volumetric topologic analysis (After Saha et al.)
More rod and plate classification, following on from the shape-preserving thinning approach DTA.
Saha P, Yan Xu, Hong Duan, Heiner A, Guoyuan Liang. Volumetric Topological Analysis: A Novel Approach for Trabecular Bone Classification on the Continuum Between Plates and Rods. Medical Imaging, IEEE Transactions on 2010;29:1821-1838. doi:10.1109/TMI.2010.2050779